Package: LDAcoop
Type: Package
Title: Analysis of Data from Limiting Dilution Assay (LDA) with or
        without Cellular Cooperation
Version: 0.1.2
Authors@R: c(
    person("Daniel", "Samaga", 
           email = "daniel.samaga@helmholtz-munich.de",
           role = c("cre","aut")),
    person("Nikko", "Brix", 
           role = "aut"),
    person("Benedek","Danko",
           role = "aut"),
    person("Kirsten", "Lauber", 
           role = "aut"),
    person("Horst", "Zitzelsberger", 
           role = "aut"))
Maintainer: Daniel Samaga <daniel.samaga@helmholtz-munich.de>
URL: https://github.com/ZytoHMGU/LDAcoop
BugReports: https://github.com/ZytoHMGU/LDAcoop/issues
Description: Cellular cooperation compromises the established method of
        calculating clonogenic activity from limiting dilution assay
        (LDA) data. This tool provides functions that enable robust
        analysis in presence or absence of cellular cooperation. The
        implemented method incorporates the same cooperativity module
        to model the non-linearity associated with cellular cooperation
        as known from the colony formation assay (Brix et al. (2021)
        <doi:10.1038/s41596-021-00615-0>: "Analysis of clonogenic
        growth in vitro." Nature protocols).
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Depends: R (>= 3.5.0)
Imports: Hmisc
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev
Repository: https://zytohmgu.r-universe.dev
Date/Publication: 2024-07-17 09:45:49 UTC
RemoteUrl: https://github.com/zytohmgu/ldacoop
RemoteRef: HEAD
RemoteSha: 40241733f63b169ab4d62db271ce13258011b4cd
NeedsCompilation: no
Packaged: 2026-10-04 07:41:25 UTC; root
Author: Daniel Samaga [cre, aut],
  Nikko Brix [aut],
  Benedek Danko [aut],
  Kirsten Lauber [aut],
  Horst Zitzelsberger [aut]